Eye Mock Stupidity

I’m all in favor of mocking stupidity, and here’s something definitely worth mocking.

In arguing for evolution, author Alan R. Rogers appeals to the Nilsson and Pelger paper on how simple it is to evolve an eye. He writes:

If eyes evolve, they must do so often and easily. Could it really be so easy?

Dan-Eric Nilsson and Susanne Pelger have answered this question. They constructed an evolutionary story much like the one that I told above.

– The Evidence for Evolution. p. 42.

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How ENV muddies the waters on the evidence for human evolution

Recently, Evolution News and Views published an article titled, The Human-Ape Missing Link — Still Missing (July 18, 2017), which attempts to cast doubt on human evolution by quoting from a recent BBC article which highlighted the massive uncertainties that still remain over the identity, appearance and date of the last common ancestor (LCA) of human beings and chimpanzees, and which even questions whether the chimpanzee is our closest relative, after all. The Evolution News and Views (ENV) article also revives the myth of an unbridgeable gap between Australopithecus and Homo.

Here’s my two-sentence rebuttal: uncertainty as to who the last common ancestor of humans and chimps was, what it looked like, and when it lived, in no way diminishes scientists’ certainty that it existed. And while the fossil record of human ancestors is very meager and patchy until about 4.4 million years ago, from that time onward, we have a veritable hodgepodge of hominins – and no unbridgeable gaps.

Well, that was quick, wasn’t it? Now for a more detailed rebuttal.

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Suffer the children

During the past few days, there has been much discussion of philosophy professor Gary Comstock’s spirited defense of infanticide, in the case of a severely handicapped newborn baby who is likely to die (New York Times, July 12, 2017). Such an infant, argues Comstock, lacks “the things that make a life: thoughts, wants, desires, interests, memories, a future.” And if did have thoughts, its dominant thought about being kept alive on a respirator would surely be: “This hurts. Can’t someone help it stop?”

Bioethicist Wesley Smith has pointed out that the case described by Comstock (who is not a doctor), of an infant suffering excruciating pain as its life is needlessly prolonged, is totally fictitious: “When life support is removed, doctors do not just let patients twist choking in the wind. They palliate — as necessary to alleviate pain and agitation.” The testimony of palliative care physician Ira Byock (whom Smith mentions in his article) is well worth citing: “In more than 35 years of practice I have never once had to kill a patient to alleviate the person’s suffering. When other measures fail, palliative sedation for alleviation of physical suffering is reliably effective. Alleviating suffering is different than eliminating the sufferer.” (Maryland Medicine vol. 17, no. 4; January 2017.) And Dr. Michael Egnor, commenting on Comstock’s article for Evolution News and Views, writes: “The notion that handicapped children intractably suffer is a lie. I’ve treated thousands of these kids. Most of the conditions that cause severe neurological impairment aren’t painful and don’t inherently cause physical suffering. Spina bifida, holoprosencephaly, various trisomies and anencephaly don’t ‘hurt,’ and in fact the children afflicted are often quite content babies. They are loved by their families, and they can enjoy life in accordance with their physical limitations.”

Wesley Smith and Michael Egnor point out that infanticide is a crime against humanity, for which doctors were hanged at Nuremberg. Some of these doctors had euthanized handicapped children. Both authors make a telling point; nevertheless, the question needs to be addressed: exactly why is infanticide wrong?

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Evolution is not design

This is a continuation of an earlier OP. Design by Evolution

When we think of design, it is usually in the context of solving some sort of problem, … To be effective, the design must address a purpose to be achieved. … Thus, effective design requires some feedback mechanism to the designer.

But perhaps we can fit the square peg of purposeless blind watchmaker evolution into the round hole of purposeful intelligent design.

Some people here at TSZ seem to think that no one ever claimed that evolution is a designer. So let’s remind them.

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Evo-Info 3: Evolution is not search

Introduction to Evolutionary Informatics, by Robert J. Marks II, the “Charles Darwin of Intelligent Design”; William A. Dembski, the “Isaac Newton of Information Theory”; and Winston Ewert, the “Charles Ingram of Active Information.” World Scientific, 332 pages.
Classification: Engineering mathematics. Engineering analysis. (TA347)
Subjects: Evolutionary computation. Information technology–Mathematics.

Marks, Dembski, and Ewert open Chapter 3 by stating the central fallacy of evolutionary informatics: “Evolution is often modeled by as [sic] a search process.” The long and the short of it is that they do not understand the models, and consequently mistake what a modeler does for what an engineer might do when searching for a solution to a given problem. What I hope to convey in this post, primarily by means of graphics, is that fine-tuning a model of evolution, and thereby obtaining an evolutionary process in which a maximally fit individual emerges rapidly, is nothing like informing evolution to search for the best solution to a problem. We consider, specifically, a simulation model presented by Christian apologist David Glass in a paper challenging evolutionary gradualism à la Dawkins. The behavior on exhibit below is qualitatively similar to that of various biological models of evolution.

Animation 1. Parental populations in the first 2000 generations of a run of the Glass model, with parameters (mutation rate .005, population size 500) tuned to speed the first occurrence of maximum fitness (1857 generations, on average), are shown in orange. Offspring are generated in pairs by recombination and mutation of heritable traits of randomly mated parents. The fitness of an individual in the parental population is, loosely, the number of pairs of offspring it is expected to leave. In each generation, the parental population is replaced by surviving offspring. Which of the offspring die is arbitrary. When the model is modified to begin with a maximally fit population, the long-term regime of the resulting process (blue) is the same as for the original process. Rather than seek out maximum fitness, the two evolutionary processes settle into statistical equilibrium.

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Introduction to Evolutionary Informatics

Introduction to Evolutionary Informatics, by Robert J. Marks II, the “Charles Darwin of Intelligent Design”; William A. Dembski, the “Isaac Newton of Information Theory”; and Winston Ewert, the “Charles Ingram of Active Information.” World Scientific, 332 pages.
Classification: Engineering mathematics. Engineering analysis. (TA347)
Subjects: Evolutionary computation. Information technology–Mathematics.1

Yes, Tom English was right to warn us not to buy the book until the authors establish that their mathematical analysis of search applies to models of evolution.

But some of us have bought (or borrowed) the book nevertheless. As Denyse O’Leary said: It is surprisingly easy to read. I suppose she is right, as long as you do not try to follow their conclusions, but accept it as Gospel truth.

In the thread Who thinks Introduction to Evolutionary Informatics should be on your summer reading list? at Uncommon Descent, there is a list of endorsements – and I have to wonder if everyone who endorsed the book actually read it. “Rigorous and humorous”? Really?

Dembski, Marks, and Ewert will never explain how their work applies to models of evolution. But why not create at list of things which are problematic (or at least strange) with the book itself? Here is a start (partly copied from UD):
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Clever methodology aimed at detecting ‘stealth atheism’

From an article in Vox entitled How many American atheists are there really?

How to find “closet atheists”

So if you can’t ask people outright whether they’re atheist and get an honest response, how do you go about finding them?

Gervais and Najle set up a very subtle test. They sent a nationally representative poll to 2,000 Americans, who were randomly assigned to two conditions.

The first condition asked participants to read through a bunch of statements like, “I am a vegetarian,” “I own a dog,” and, “I have a dishwasher in my kitchen.”

All the participants had to do was simply write down the number of statements that were true for them.

The value of this method is that participants don’t have to directly say, “I am a vegetarian,” or, “I’m a dog owner” — they only have to acknowledge the number of statements that apply to them. That alone should zero out any embarrassment or hesitance to admit to a particular item.

That’s important because the other 1,000 or so participants saw the exact same list — but with one statement added: “I believe in God.”

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Credulous PLOS One publishes evidence for body trauma on the Turin Shroud image

Mystic Post is a Website which publishes articles on Catholic visions (especially Medjugorje). It would be an understatement to say that its coverage tends to be rather uncritical, but from time to time, I take a look at it anyway. One thing I like about visionaries is that they make prophecies which are falsifiable, and Mystic Post has been throwing out very broad hints that something big may happen this year. A few hours ago, I came across an article on Mystic Post, titled, Breaking News – New Prestigious Study on Shroud of Turin…”There is blood of a man tortured and killed” (July 11, 2017). The article quoted extensively from a story by Andrea Tornielli, published in the printed edition of the Italian daily newspaper, La Stampa (July 1, 2017). To my great surprise, the opening paragraph cited a study which recently appeared in PLOS One (emphases are in the original):

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For VJ Torley: Christianity’s consistency with Evolutionary Theory, JB Peterson’s Interview

Various creationists and ID proponents, myself included, have raved about the work of elite scholar and clinical psychologist Jordan B. Peterson who connected the rise of Christianity with concepts in evolutionary theory. His recent 2.5-hour interview was profound on many levels. I provide a link to the interview below.

Even though Peterson is an die-hard evolutionist, many ID proponents and creationists have said they were blessed to hear what he had to say. I know I was. Since I know VJ studied the topic of animal intelligence, I thought Peterson’s work might be of interest to him since Peterson ties the rise of Christianity to behavioral and neurological traits he sees deeply conserved in the mammalian kingdom.
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The Problem of Predictive Equivalence

In the previous section I described the argument that many biologists have endorsed for thinking that the hypothesis of evolution by natural selection is more likely than the hypothesis of intelligent design. This argument considers the observation that organisms are often imperfectly adapted to their environments and construes the design hypothesis as predicting that organisms should be perfectly adapted. This version of the design hypothesis presupposes a very definite picture of what God would be like if he existed.

Actually, in the previous section Sober was primarily concerned with creationism. This is made rather obvious by the chapter title. It’s as if he was writing about Creationism and then Intelligent Design burst on the scene and he had to change things up to make it appear as if the two are the same. But what’s a philosopher of biology to do?

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Tamagotchi, J. K. Rowling and God: A Short Essay on the Problem of Evil

Catholic philosopher (and former atheist) Edward Feser might be many things, but he certainly isn’t dull. Nor is he afraid of grappling with the big questions. In the latest issue of First Things, he discusses the problem of evil in a wide-ranging interview with Connor Grubaugh, where he talks about his three favorite books in the field of contemporary analytic philosophy. Feser (who is Associate Professor of philosophy at Pasadena City College) is a Thomist, for whom the claim that the existence of evil and suffering constitutes evidence against God’s existence reflects a faulty conception of the relationship between creature and Creator. God is not just a Being who interacts with us on a personal level; rather, He is the very Author of our existence. And just as an author (such as J. K. Rowling) has no obligations to the characters in her stories, so too, God has no obligations towards us. Consequently there can be no question of Him ever doing us an injustice.

In today’s essay, I’d like to explain why I think Professor Feser’s solution is unsatisfactory, and why I think the problem of evil is much more serious than Feser supposes. I won’t be proposing my own solution, however. All I can do is briefly outline how I believe the problem can be defused, and why I don’t think it’s fatal for theism.

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Recycling bad arguments: ENV on the origin of life

During the past few days, Dr. Brian Miller (whose Ph.D. is in physics) has written a series of articles on the origin of life over at Evolution News and Views:

Thermodynamics of the Origin of Life (June 19, 2017)
The Origin of Life, Self-Organization, and Information (June 20, 2017)
Free Energy and the Origin of Life: Natural Engines to the Rescue (June 22, 2017)
Origin of Life and Information — Some Common Myths (June 26, 2017)

Dr. Miller’s aim is to convince his readers that intelligent agency was required to coordinate the steps leading to the origin of life. I think his conclusion may very well be correct, but that doesn’t make his arguments correct. In this post, I plan to subject Dr. Miller’s arguments to scientific scrutiny, in order to determine whether Dr. Miller has made a strong case for Intelligent Design.

While I commend Dr. Miller for his indefatigability, I find it disappointing that his articles recycle several Intelligent Design canards which have been refuted on previous occasions. Dr. Miller also seems to be unaware of recently published online articles which address some of his concerns.
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Testing Evolution – Cost

There’s no end to the claims made for and about evolution and what evolution can allegedly accomplish without intelligent guidance. It seems as if Evolution ought to be treated as a god and capitalized. What would a true skeptic do without Evolution?

Far less common are actual metrics for testing evolutionary claims. For example, requests for how to write an actual test for claims about “the power of cumulative selection” are met with silence or scorn.

J.B.S Haldane once wrote:

A satisfactory theory of natural selection must be quantitative. In order to establish the view that natural selection is capable of accounting for the known facts of evolution we must show not only that it can cause a species to change, but that it can cause it to change at a rate which will account for present and past transmutations.

Was Haldane wrong? Did he expect too much from the theory?

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Were some “types” of “dinosaurs” like Theropods/T-rex, simply ground birds that adapted to a diverse planet??

I wrote a thread once about Theropods having like anatomy with birds as possibly just a convergence of bone type with physics. So birds did not evolve from dinosaur types like theropods.

I have watched recently youtube docs on T-rex and theropods etc and how they are claimed to be birds.

Once again its ac classification error. First there was no dinosaurs. tHey are just KINDS with some trivial like traits. just as mammals or reptiles are just KINDS of creatures with like traits. no relationship otherwise from a creator ir from evolutionary lineage.

It occured to me as another option that these theropods and T-rex could be simply ground birds.

there was later, post flood or above the k-pg line, 6 and 9 foot moas and elephant birds on islans like New Zealand and madasgaschar, and South America, and elsewhere.

They also were meat eaters, sometimes, and could not fly or even had wings/yet flourished in great sizes.

I think its a very viable option that many KINDS of dinos who have very bird like anatomy were in fact just ground birds. So T-rex, despite its great head/teeth, was possibly just a ground bird that did not roar. I saw a Youtube doc by a Dino guy, who advised the Jurassic park movies, who argues T-Rex etc head shape changed greatly as they grew older.

I suggest its very likely true that some ‘dino” types like the bird bone ones were just birds. Not reptiles. Just adapted to a rough post fall world. Just that simple. Possible also for others to have like anatomy for like needs but I’m leaning towards like anatomy means the same thing.

So the evolution of birds from dinos is not true and based on a classification system more then observation and other options of anatomy origins.

 

A recipe for irreproducible results

Abstract.Recent studies have shown that many results published in peer-reviewed scientific journals are not reproducible. This raises the following question: why is it so easy to fool myself into believing that a result is reliable when in fact it is not? Using Brownian motion as a toy model, we show how this can happen if ergodicity is assumed where it is unwarranted. A measured value can appear stable when judged over time,although it is not stable across the ensemble: a different result will be obtained each time the experiment is run.

just for fun.

https://arxiv.org/pdf/1706.07773.pdf

Is Academic Chauvinism As Dangerous As Climate Disruption Denial

The following appeared in my hometown paper today.
I wondered what all of you might have to say about it.
I typed it all out but please remember the title was created by the editor not the letter writer.

Not all ‘science’ is equal

EDITOR: The word science has been bastardized. Its common usage does not distinguish between the hard, soft and historical sciences.

Among the hard sciences, namely physics, chemistry and some aspects of biology, e.g., microbiology, genetics, etc., one relies on experiments that generate mathematical theories that make definite predictions that can be experimentally verified, and thus to theories that can definitely be falsified. The hard sciences deal with only the physical aspect of nature, where purely physical devices can be used to collect relevant data.

Among the soft sciences — social sciences, psychology, etc., — studies are rarely based on mathematical descriptions, and so definite predictions are elusive and pregnant with complicated assumptions. Here one is dealing with humans, and as such with essentially the nonphysical, e.g., issues of the human mind, and the supernatural aspects of nature, owing to humans being spiritual beings.

Finally, among the historical sciences, such as evolutionary theory, climate change, etc., studies are more akin to forensic science, where extant data is used to extrapolate and make tentative predictions. There is no single, well-defined theory that makes predictions that can be experimentally tested, and thus falsify the theory. Here one is certainly dealing with the whole of reality — the physical/nonphysical/supernatural aspect of nature.

It was written by a PhD. of Physics and my personal take is that it represents professional chauvinism.
As a side note the author is also a creationist though I don’t know if an Old or Young Earth creationist.

The Mysteries of Evolution: 2. The Origin of Life and the miserable failure to reassemble Humpty Dumpty

Not much can be written after you watch the two videos above…

It is pretty easy to understand for those who choose to understand that the theory of abiogenesis and the probability of life spontaneously self-assembling is just a science-fiction story to fill the void for those who need to believe in something other than the obvious…

If the living cell can’t be reassembled in a lab, what evidence is there that life spontaneously self-assembled other than in science-fiction stories?

Now, let’s listen to the excuses…

The Evolution of Sex

This has long been an interest of mine. It dates back to the old talk.origins days, prompted by a Creationist taunt with familiar tone – “I’d like to see someone explain the evolution of sex …” (with the implicit “hurr, hurr”). I articulated some thoughts, then was rounded on by the ‘mainstream’ community. I got a flavour of the world through Creationist eyes – an equally familiar tone: some very sharply expressed contempt and an invitation to f*** off back to high school and learn meiosis.

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