Category Archives: Evolution

From the parts to the whole or from the whole to the parts.

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Alan doesn’t believe that there are any other proposed explanations to rival ‘evolutionary theory’. At least none that so effectively account for the facts.

It is often said that there is no single theory of evolution, there are a group of mutually consistent theories. Be that as it may, I think we all understand the point Alan is making.

Evolution is a process whereby life has somehow emerged from a lifeless physical world and there is no overall teleology involved in its diversification. The reproductive processes produce a natural variety of forms which can take advantage of previously unoccupied niches. The basic sequence of events from primal to present are: lifeless minerals, water systems and gaseous atmosphere, followed by the arrival of simple prokaryote life forms, followed by multicellular organisms. Life is solely the product of physical and chemical processes acting on lifeless matter.

In this view life is nothing special, it just occurred because physical matter chanced to arrange itself in a particular way. And consciousness is just a by product of life.

But I suggest that there is an alternative way in which life as we perceive it could have come about.

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Evolution- Observations and Beliefs

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We all know the story physical life has built up slowly on this earth. Its diversity now ranges from prokayotes to individuals possessing self-conscious creativity.

Out of those that believe in some form of evolution who would take issue with the very rough account that follows?
Life has its beginning in water. Multi-cellular life makes its appearance. The atmosphere changes in such a way as to allow animal life to evolve. Living creatures emerge from the water, moving over the land and breathing the air. At some point plants also spread out of the water and colonised the land. With animals came sentience and the development of individual consciousness. Possessing four limbs provided mobility while also allowing further development which gave a stable means of supporting the body. Organisms can then evolve in which these limbs are in a position to hold the body clear of the ground. Sentience develops to the stage where animals not only possess various sensations but they can also consciously communicate their inner feelings to others and make sense of the communication of others. The latest novel attributes of life are self consciousness and rational thinking. Humans not only communicate feelings but we can communicate objective thinking and are the most creative beings on the planet. We also have a modicum of free will which can be continuously developed over time. My account is beginning to contain details which, if people have any interest, a few might deem worth challenging.

Now it gets more controversial. Continue reading →

Covid-19 vs. Intelligent Design “Theorists” and their Ideology

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Lehigh University biochemist and IDT spokesperson Dr. Michael Behe was recently asked by the Discovery Institute (DI) to write about covid-19. The following is to be found among what he wrote:

“do I think viruses were designed? Yes, I most certainly do! The viruses of which we are aware — including the coronaviruses, Ebola, and HIV — are exquisitely, purposively arranged, which is the clear signature of intelligent design [sic, properly “Intelligent Design”, since this “signature” is not being attributed to “strictly natural causes”]. Well, then does that mean the designer [sic, Divine Name = properly capitalized, “the Designer”] is evil and wants people to suffer? No, not necessarily. I’m a biochemist, not a philosopher. Nonetheless, I see no reason why a designer [sic, Divine Name = properly capitalized, “the Designer”] even of such things as viruses should be classified as bad on that basis alone.” – Michael Behe (10-03-2020, https://evolutionnews.org/2020/03/evolution-design-and-covid-19/

Behe concluded the article stating that he has “no reason to think either that viruses weren’t designed [meaning, by a Divine Designer] or that the designer [sic, Divine Name = properly capitalized, “the Designer”] of viruses isn’t good”.

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Measuring Active Information in Biological Systems

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I thought some of you might be interested to know that a paper of mine was recently published in BIO-Complexity – “Measuring Active Information in Biological Systems.” The goal of the paper is to provide a way of verifying whether (and how much) a mutational process is directed or undirected. I posted an overview of the paper at UD if you don’t have time to read it, but I thought this crowd might enjoy the details more.

Also, for background of why this is relevant, you might read my earlier paper, “Evolutionary Teleonomy as a Unifying Principle of the Extended Evolutionary Synthesis“.

Viruses: another chicken and egg paradox?

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As the COVID 19 hysteria is unfolding almost all over the world, many are asking the question:

Where did the viruses come from?

ID proponents, like Michael Behe, have gone on record saying that viruses were designed, in most cases they cause no harm, but their role in nature is not yet fully understood here.

On the other hand, the proponents of Darwinian theory of evolution claim that viruses evolved, because why would an omnipotent God/ID designed something harmful, like viruses? So, viruses must’ve evolved…

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Coronavirus: Evolution vs ID

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Another deadly virus is just around the corner: coronavirus, as predicted by evolution…

Since it was predicted, what had been done to prevent it?

We have all sorts of experts visiting TSZ, such as immunologists, population geneticists, biochemists, and the like…

What have they done in this field?  How about ID?

What are you doing personally to protect yourself, and your family,  from another possible epidemic?

I have lived through SARS, wearing full protective gear for many days. My wife was doing initial screening at the hospital entrance, while few months pregnant…

Is same, or worse, yet to come?

Behe vs. Swamidass I, as “God and/or Evolution?” Time to yawn, politely applaud or cheer?

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The biggest news of this week for the “conversation” this blog is in some small way a part of will likely be the discussion between Drs. Michael Behe and S. Joshua Swamidass in Texas. The answer for both men to the polemical question above is not “God w/out evolution”, but rather “God with evolution,” iow both God and evolution. So what else important is there left for them to disagree about? http://www.veritas.org/location/texas-a-m-university/

For Behe, “evolution” has a narrower meaning than it does for Swamidass. One key question, that likely won’t be asked, is: how wide is Swamidass’ meaning of “evolution” and where does it stop (i.e. what doesn’t ‘evolve’)? Is Swamidass, who somewhat incredulously claims to be neither a creationist nor an evolutionist, actually both? One of the biggest challenges unaddressed still by Swamidass regarding his evolutionism will be met when he starts describing or explaining the “limits of evolutionary theories”, rather than only “the great possibilities of evolutionary theories”, now as we live in a post-Darwinian, extended synthesis scenario.

We may nevertheless hope for some reconciliation, or even a moment or two of peace amidst an artificial storm in the USA involving “Intelligent Design”, evolution, and creationism. Those moments will likely constitute a rare pause in their otherwise contrary apologetics approaches, both taking a “public understanding of science” attitude of pedagogical communication to the stage. We may thus, purely on the communications front, simply get either a parody of abstract intellectualism driven by “religious” or “quasi-religious” agendas, or more positively, a few simple concessions of common ground that shouldn’t be too difficult for either of them to find, or to make towards each other.

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Is Behe’s acceptance of common descent confusing?

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In his recent video Michael Behe explains the reasons for his acceptance of common descent.

Do you find it confusing?

Most members of the Discovery Institute find the idea of common descent lacking. Behe, ‘for the sake of the argument’ , is willing to accept it and, instead, focus on the mechanism of Darwinian evolution, natural selection and random mutations, as insufficient to explain evolution.

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Walking sharks evolving fast. Don’t miss out!

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It boggles my mind when I read Darwinian propaganda like this:

“These sharks have evolved to walk on land—and they did it quickly” here

Or this Science Alert:

“Rapid Evolution Made These Paper Wasps Capable of Recognising Each Other’s Faces” here

Or

“Profound’ evolution: Wasps learn to recognize faces” here

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Evolution (“accident & luck”) vs. Careful Advanced Planning, according to whom?

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A psychiatrist in Toronto, Canada, in defense of swamidass’ fellow secular methodological naturalist and atheist partner in provocation over at PS, Nathan Lents (Human Errors), just said something I find quite curious, in case he is serious in his claim. It had appeared to me that this person who said it promotes ideological evolutionism. Yet this claim establishes at least some kind of important knowledge ‘boundary’ or ‘limit’ that ‘evolutionary’ thinking does not and cannot cross by definition. Perhaps he will come here to try to explain his terms in an effort to help clarify this difficulty.

Dr. Faizal Ali says,

“The truth is that evolution largely proceeds by accident and luck, both good and bad, and rarely if ever arrives at a solution of the sort that would be found by careful advanced planning.” https://betterrightthanhappy.com/nathan-lents-on-our-imperfect-body/

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’Divergence of Character’ Myth

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As shown repeatedly, “Nothing in Evolution Makes Sense. Period.” Not natural selection, gradualism, human evolution, UCD, tree of life, etc. And just to confirm, let’s look at another one of the nonsensical concepts of “evolution”.

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Does Swamidass’ new “genealogical adams and eves” hypothesis unknowingly serve to “make God a monster”?

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As 2020 both cools down in temperature and heats up in rhetoric, here is a response to S. Joshua Swamidass’ recent book that deserves more air time given how a few evangelical Protestant theologians and apologists are expressing surprised praise at it, calling it a ‘game changer’ because of ‘genealogy’ vs. ‘genetics’. I would consider it a ‘game changer’ only in a borrowed or catch-up sense of that term, given Swamidass’ YECist+ audience. Any thoughts here on this critical review of the book by a fellow evangelical active at BioLogos?

From what I’ve read so far, I do not see that Swamidass “makes God a monster” in the book. That rather appears to be what comes from Johnson’s hermeneutics, rather than Swamidass’ intentions or expressions. BioLogos was similarly confused, and hadn’t read Kemp, much like Swamidass (that is, until he finally did). Swamidass has previously written about dungeons & suffering, which perhaps by some people may be mistaken as ‘monstrous’. It would be more appropriate and charitable to say, ‘he knows not what he does’ by opening this rift. Thus, he speaks about “what it means to be human?” as a distant (methodological) naturalist, with an important background personal concern involving local fellow YECists and activistic sociology behind the book’s publication (e.g. choice of publishing house).

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Of “models” and “algorithms”

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I was short with Joe Felsenstein in the comments section of “Stark Incompetence,” a post in which I address, well, um, the stark incompetence on display in a recent publication of Eric Holloway. I have apologized to Joe, and promised to make amends with a brief post on the topic that he wants to address. Now, the topic is a putative model that Eric introduced in “Mutual Algorithmic Information, Information Non-growth, and Allele Frequency” (or perhaps an improved version of the model). Here is a remark that I addressed to Joe:

Tom English: As you know, if a putative model is logically inconsistent, then it is not a model of anything. I claim that that EricMH’s putative model is logically inconsistent. You had better prove that it is consistent, or turn it into something that you can prove is consistent, before going on to discuss its biological relevance.

I will not have to go far into Eric’s post to identify inconsistencies. After explaining the inconsistencies, which I doubt can be eliminated, I will remark on why the “model” is not worth salvaging. The gist is that Eric’s attempted analysis puts a halting, output-generating simulator of a non-halting, non-output-generating evolutionary process in place of the process itself. An analysis of the simulator would not, in any case, be an analysis of the simuland.

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Behe and Co. in Canada

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This past Friday, I bumped into Dr. Michael Behe, and again on Saturday, along with Drs. Brian Miller (DI), Research Coordinator CSC, and Robert Larmer (UNB), currently President of the Canadian Society of (Evangelical) Christian Philosophers. Venue: local apologetics conference (https://www.diganddelve.ca/). The topic of the event “Science vs. Atheism: Is Modern Science Making Atheism Improbable?” makes it relevant here at TSZ, where there are more atheists & agnostics among ‘skeptics’ than average.

On the positive side, I would encourage folks who visit this site to go to such events for learning/teaching purposes. Whether for the ID speakers or not; good conversations are available among people honestly wrestling with and questioning the relationship between science, philosophy and theology/worldview, including on issues related to evolution, creation, and intelligence in the universe or on Earth. Don’t go to such events expecting miracles for your personal worldview in conversation with others, credibility in scientific publications or in the classroom, if you are using ‘science’ as a worldview weapon against ‘religion’ or ‘theology’. That argument just won’t fly anymore and the Discovery Institute, to their credit, has played a role, of whatever size may still be difficult to tell, in making this shift happen.

A question arises: what would be the first question you would ask or thing you would say to Michael Behe if you bumped into him on the street?

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S. Joshua Swamidass and Social Darwinism – a match made on Earth, not in Heaven

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Over at Peaceful Science, Joshua Swamidass has made another strange and unsubstantiated claim. He has attempted to speak again on behalf of (all) ‘scientists,’ as is his linguistic tendency, yet in this case about ‘social Darwinism’:

“Social Darwinism was a thing that is legitimately connected to the holocaust [sic]. However, scientists today reject Social Darwinism. Even atheists should thank God for this.” https://discourse.peacefulscience.org/t/darwinism-and-social-darwinism/6873/2

It’s a bit saucy, perhaps all well & good to suggest that atheists should thank God for something, anything. Yet one of the most active living and agitating ideological evolutionists and one of his co-authors are actually trying to get people to accept ‘Social Darwinism’. https://evolution-institute.org/truth-and-reconciliation-for-social-darwinism/ How does Joshua deal with this apparent blindspot in his approach?

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Swamidass vs. Nelson – trying to find a “Common Narrative with ID on MN”?

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I’ll intervene on this conversation started by S. Joshua Swamidass as my guess is he’s going to mangle terms & then claim mastery over them, as he has done in the past on the topic of ‘methodological naturalism’ (MN). Paul Nelson (of micro-/macro- distinction) has posted here in the past & has done a fine job of staying more neutral, scholarly and welcoming to discussion than most IDists at the DI. It would be welcome for Nelson to clarify, re-iterate or to add any points here that Swamidass might not wish to address at PS, or in case the naive scientism cum MN lobby grows too loud there.

This is one of those topics where in my view Swamidass scores quite low in credibility and coherency (much like I score in biology! = P). This makes sense because he has little training and doesn’t seem to have done much personal reading in philosophy, social sciences or humanities. Paul Nelson, on the other hand, did a PhD in the philosophy of biology. So if Swamidass starts to try to out-philosophize Nelson, things could get hilarious quickly, as they have in the past, e.g. with Jonathan Burke, who discovered predecessors to GA -> GAE that Swamidass missed & had to add at the last minute.

Let’s see if Swamidass is ready to learn if the term ‘methodological naturalism’ is really a sword he wants to fall on or not. So far, it has been. Nelson, as do I, rejects MNism, & not just as a misnomer.

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Behe vs Swamidass: Why?

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According to Joshua Swamidass Michael Behe and him have a lot in common… Swamidass has even publicly defended Behe on his blog by demanding a fair hearing.

Not only that, Swamidass agrees with Behe on many evolutionary/ID issues, such as guided evolution…

So, why would Behe and Swamidass square off at Texas A & M University in 2020?
What are they going to discuss? Not the polar bear evolution/devolution fiasco, right?

What do you think?

No cloning theorem: the double edge sword

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Essentially, there are 2 types of cloning…

Biological cloning leading to clones such as identical twins who share exactly the same DNA.

Or artificial, genetically engineered cloning leading to such clones as plants whose DNA is also identical.

But there exists a more precise kind of cloning in physics that reaches all the way to the subatomic level of particles. Everything in the universe is made up of elementary quantum particles and the forces by which they interact, including DNA and us. This kind of cloning is more detailed because it involves the superposition of subatomic particles; their relative positions (particles can be in more than 1 position or state at the time), momenta and energy levels of every particle and all of their bonds and interactions are exactly the same in the copy (clone) as the original.

This kind of perfect cloning is impossible. It has been proven mathematically and formulated into the no cloning theorem, which states:

“In physics, the no-cloning theorem states that it is impossible to create an identical copy of an arbitrary unknown quantum state.”

How those two types of cloning apply to life systems, such as us, our DNA and so forth?

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Echo Chambers & Epistemic Bubbles

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This article might help some people make better sense of what goes on around here. https://aeon.co/essays/why-its-as-hard-to-escape-an-echo-chamber-as-it-is-to-flee-a-cult

Unarguably, young earth creationism (YECism) was & still is an echo chamber. It’s a shock to YECists when then get out of their common circles to hear statistically higher educated Christians than they are speaking about how compatible accepting limited biological evolutionary theories with their religious faith actually is. So when they get out of their echo chamber and realize that learning and research hasn’t stopped but rather continues, even among their fellow religious, that they didn’t know existed, it can have a chilling or liberating effect.

The Intelligent Design movement with its Intelligent Design theory/ideology (IDism) was & still is an echo chamber, based, governed & funded in Seattle, USA. I’d welcome an open conversation with Stephen C. Meyer & John G. West about this. Indoctrination going one way is all they’ve focused on, while indoctrination going the other way is an elephant in the room that IDists will eventually need to come around to address.

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