The Discontinuity of Nature

Typology is perfectly consonant therefore with descent with modification. Each cladogram is witness to descent with modification and the existence of distinct Types. The modifications are novel taxa-defining homologs, acquired during the process of descent along a phylogenetic lineage, each of which defines a new Type.

– Denton, Michael. Evolution: Still a Theory in Crisis

I repeat, Michael Denton accepts common descent is is not a Creationist. My original thread has been inundated with scoffing and mocking and young earth creationism, all of which are far removed from the subject matter of Denton’s latest book. Trying again.

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Still a Theory in Crisis

Michael Denton’s new book is out, Evolution: Still A Theory In Crisis.

Denton’s stance is for structuralism and against functionalism, especially as functionalism appears in it’s current form as the modern synthesis or neo-Darwinism (the cumulative selection of small adaptive changes).

Denton argues for the reality of the types, that “there are unique taxon-defining novelties not led up to gradually from some antecedent form” and that the lack of intermediates undermines the Darwinian account of evolution. He also argues that a great deal of organic order appears to be non-adaptive, including “a great number of the taxa-defining Bauplans,” and that this also undermines the Darwinian account of evolution. Evo-devo is also showing us that “Darwinian selection is not the only or even the main factor that determined the shape and main branches of the great tree of life.”

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“Uncommon Descent” and “The Skeptical Zone” in 2015

(crossposted from here and here)

(Edited Feb 2, 2016 to add eight figures)

Since 2005, Uncommon Descent (UD) – founded by William Dembski – has been the place to discuss intelligent design. Unfortunately, the moderation policy has always been one-sided (and quite arbitrary at the same time!) Since 2011, the statement “You don’t have to participate in UD” is not longer answered with gritted teeth only, but with a real alternative: Elizabeth Liddle’s The Skeptical Zone (TSZ). So, how were these two sites doing in 2015?

Number of Comments 2005 – 2015

year 2005 2006 2007 2008 2009 2010 2011 2012 2013 2014 2015
UD  8,400 23,000 22,400 23,100 41,100 24,800 41,400 28,400 42,500 53,700 53,100
TSZ  2,200 15,100 16,900 20,400 45,200

In 2015, there were still 17% more comments at UD than at TSZ – 53,100 to 45,200.

UD-2015-02

Though UD is still going strong, there is a slight downwards trend (yellow line) in the daily number of comments.
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Christiantoday.com sides with UMC against the DI / ID.

Here’s the article in full:

Christian Today Article

The best bit?:

….However, the UMC has taken the view – expressed though it is in dusty legalese – that in allowing the promotion of intelligent design at its conference would to connive at something which is, not to put too fine a point upon it, not true.

In this respect, it is surely right. It’s always possible to find things about life and its development that evolutionary theory has not yet succeeded in explaining. To argue from this that the answer must be “God did it” is ultimately self-defeating. Science advances, the number of unknowns diminishes, and God is driven into a smaller and smaller space accordingly. This “God of the gaps” approach has long been discredited.

The UMC appears to have taken the view that giving a platform – no matter how small – to a view as mistaken as this undermines the credibility of the gospel because it encourages people to believe things that aren’t true. Building a faith around falsehood is putting people’s souls in peril. The Discovery Institute may not like it, but the UMC is surely right to stand its ground.

(format not the same as the original). Thoughts?

The Reasonableness of Atheism and Black Swans

As an ID proponent and creationist, the irony is that at the time in my life where I have the greatest level of faith in ID and creation, it is also the time in my life at some level I wish it were not true. I have concluded if the Christian God is the Intelligent Designer then he also makes the world a miserable place by design, that He has cursed this world because of Adam’s sin. See Malicious Intelligent Design.
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Testing Intelligent Design

ID is based on three premises and the inference that follows (DeWolf et al., Darwinism, Design and Public Education, pg. 92):

1) High information content (or specified complexity) and irreducible complexity constitute strong indicators or hallmarks of (past) intelligent design.

2) Biological systems have a high information content (or specified complexity) and utilize subsystems that manifest irreducible complexity.

3) Naturalistic mechanisms or undirected causes do not suffice to explain the origin of information (specified complexity) or irreducible complexity.

4) Therefore, intelligent design constitutes the best explanations for the origin of information and irreducible complexity in biological systems.

So to falsify ID all you have to do is show that undirected causes such as natural selection and drift can produce CSI and/ or IC. Continue reading

Beating a dead horse (Darwin’s Doubt)

First off I must apologize for doing another post on a subject that’s been done to death around here, but I’ve been meaning to make a post about this for a while but other stuff kept coming up. Anyway, things have quietened down at work where I now only have to maintain some cell cultures, so I have a bit of time duing the christmas holiday.

My post, which is a repost of something I also brought up in a thread on Larry Moran’s sandwalk blog, is about a chapter in Stephen Meyer’s book Darwin’s Doubt and what I can, if I’m being generous, only attribute to extremely shoddy scholarship.
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Intention, Intelligence and Teleology

On the left is a photograph of a real snowflake.  Most people would agree that it was not created intentionally, except possibly in the rather esoteric sense of being the foreseen result of the properties of water atoms in an intentionally designed universe in which water atoms were designed to have those properties.  But I think most people here, ID proponents and ID critics alike, would consider that the “design” (in the sense of “pattern”) of this snowflake is neither random nor teleological.  Nor, however, is it predictable in detail.  Famously “no two snowflakes are alike”, yet all snowflakes have six-fold rotational symmetry.  They are, to put it another way, the products of both “law” (the natural law that governs the crystalisation of water molecules) and “chance” (stochastic variation in humidity and temperature that affect the rate of growth of each arm of the crystal as it grows). We need not, to continue in Dembski’s “Explanatory Filter” framework, infer “Design”.

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Merry Kitzmas!

December 20th, 2015 is the tenth anniversary of the decision in Tammy Kitzmiller, et al. v. Dover Area School District, et al. 

Judge Jones (a Bush-appointed Republican) wrote a 139-page legal opinion which can be summarized thus: 

Teaching intelligent design in public school biology classes violates the Establishment Clause of the First Amendment to the Constitution of the United States (and Article I, Section 3, of the Pennsylvania State Constitution) because intelligent design is not science and “cannot uncouple itself from its creationist, and thus religious, antecedents.”

wikipedia article, side bar 

Despite the precedent set by Kitzmiller/Dover, creationist and Intelligent Design advocates continue to battle to remove teaching of evolution from public schools and to protect teachers who insert biblical creationist or ID speculations into science classes.

I found this interesting essay in response to our current “friend” John West from 2007, when JW applauded passage of Louisiana creationism law.

All sorts of laws advance secular purposes—that’s what laws are supposed to do, and the Constitution assumes as much—but no law may advance a merely religious purpose under the Constitution. Thus those who lobby for law to advance a religious purpose are indeed under a disadvantage, one traceable to the Constitution itself,which purposely erects a roadblock in the path of those who would want to use the government to propagate a religion. It does not erect a similar roadblock to those who would use the government for secular purposes[see essay for footnote], whether it be to set up a fire department, or run the U.S. Army, or the Post Office, or whether it be to teach students about biological science. It is therefore perfectly valid for a secularist to attack the religious motivations of her political opponents, while simultaneously rallying her own political supporters to secularism.

Timothy Sandefur

I think it’s particularly interesting that Sandefur identifies the non-symmetry between trying to advance religious purposes and trying to advance secular ones, which I know many religious people mistake.

Happy anniversary, y’all

The Discovery Institute versus Nick Matzke

Earlier this week, Nick Matzke published an article at Science that uses modern phylogenetics techniques to analyze how creationist (or antievolution, if you prefer) legislation has evolved in the post-Dover era (note: I have not read the paper yet).  This seems to have struck a pretty sensitive nerve over at the Discovery Institute.  On the Evolution News and Views blog, the DI’s John West published an article that all but accuses Matzke of misappropriation of taxpayer funding because he acknowledges funding support from an NSF grant that doesn’t appear to be obviously connected to the content of this particular piece of research.

Needless to say, that accusation is as silly as it is groundless, which Matzke explains here.  Regardless of the merits (or obvious lack thereof) of the allegation, I’m rather curious regarding West’s motivations for making such a claim.  It seems ugly,  intemperate and ill-advised even by the DI’s standards.  Are they upset that creationists are once again getting a black eye in a prominent and respected scientific journal?  Is the fact that the article was written by somebody who was instrumental in the ID movement’s failure during the Dover trial what’s driving this response?  Something else entirely?

Whatever the reason, I view this accusation by West as a particularly egregious example of bad behavior on the part of the DI, and I wanted to bring it up for discussion here.

 

Are we in a war?

Barry Arrington, owner of the pro-ID blog, Uncommon Descent is alleged to have written the following in an email to a contributor:

We are in a war. That is not a metaphor. We are fighting a war for the soul of Western Civilization, and we are losing, badly. In the summer of 2015 we find ourselves in a positon very similar to Great Britain’s position 75 years ago in the summer of 1940 – alone, demoralized, and besieged on all sides by a great darkness that constitutes an existential threat to freedom, justice and even rationality itself.

 

In this thread I don’t want to discuss the rights and wrongs of the email itself, nor of whether or not TSZ constitutes a “great darkness”.  Barry is entitled to decide who posts at UD and who does not; it’s his blog.

What interests me is the perception itself, which I suspect is quite widely shared.

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Intelligent Design is NOT Anti-Evolution

Intelligent Design is NOT Anti-Evolution

In order to have a discussion about whether or not Intelligent Design is anti-evolution or not we must first define “evolution”. Fortunately there are resources available that do just that.

Defining “evolution”:

Finally, during the evolutionary synthesis, a consensus emerged: “Evolution is the change in properties of populations of organisms over time”- Ernst Mayr page 8 of “What Evolution Is”

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Answer to Barry Part 1 (and, inadvertently, 2)

Barry seems to have noticed TSZ again, and so I will take this opportunity of inviting him over here, where he can post freely, and will not be banned unless he posts porn or malware or outs someone, which I expect he can manage not to do.

And he responds to my post, Lawyers and Scientists.  He does so in two parts, so I will devote two posts to them.  Here is my response to his first part.  Barry writes:

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Barry finally gets it?

Barry Arrington was astonished to find that Larry Moran agreed with him that it would be possible for some future biologist to detect design in a Venter-designed genome.

He was further astonished to find that REC, a commenter at UD, agreed with Larry Moran.

Barry expresses his epiphany in a UD post REC Becomes a Design Proponent.

Has Barry finally realised that those of us who oppose the ideas of Intelligent Design proponents do not dispute that it is possible, in principle, to make a reasonable inference of design?  That rather our opposition is based on the evidence and argument advanced, not on some principled (or unprincipled!) objection to the entire project?

Sadly, it seems not.  Because Barry then gives some examples of his continued lack of appreciation of this point.  Here they are:

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More statistical confusion…

At UD I noticed, while I was checking the Moran-Arrington score, I couldn’t help noticing a news item entitled, provocatively (for me) Psychology does not speak the language of statistics very well.

So being a psychologist who teaches statistical methods to psychology students, I had to click, and found that it was a report of a blog piece here called Statistics Shows Psychology Is Not Science

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